BioinformaticsBioinformaticsPeer-reviewed
Scalable computation of ultrabubbles in pangenomes by orienting bidirected graphs
Juha Harviainen, Francisco Sena, Corentin Moumard…·Alexandru Ioan Tomescu
The paper introduces a linear-time algorithm to compute ultrabubbles in bidirected pangenome graphs, achieving significant speedups over existing methods.
DOI 10.1093/bioinformatics/btag235