Author

V. O'Flaherty

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Assay:metagenomics· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:bacteria (other)· 1 Research Focus:batch correction / integration· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

F. Abram· 2 shared F. S. Paula· 2 shared A. Davidsson· 1 shared A. Schnurer· 1 shared A. Trego· 1 shared A.-K. C. Petersen· 1 shared B. Muller· 1 shared C. Butler· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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2 shared papersMicrobiology

F. Abram

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Author profile →

5 papers

Recent·Most cited

MiDAS 5: Global diversity of bacteria and archaea in anaerobic digesters

M. K. D. Dueholm, K. S. Andersen, A.-K. C. Petersen, V. Rudkjoebing, M. Alves, Y. Bajon-Fernandez, D. Batstone, C. Butler, M. C. Cruz, A. Davidsson, L. Erijman, C. Holliger, K. Koch, N. Kreuzinger, C. Lee, , P. H. Nielsen

The paper expands the MiDAS database with global anaerobic digester microbiome data, revealing environmental influences on microbial communities and identifying core taxa.

bioRxiv · Aug 24, 2023Microbiology

ASSEMBLY AND DYNAMICS OF MICROBIAL COMMUNITIES IN GRANULAR, FIXED-BIOFILM AND PLANKTONIC METHANOGENIC MICROBIOMES VALORIZING LONG CHAIN FATTY ACID (LCFA)-RICH WASTEWATER

S. Singh, J. M. Rinta-Kanto, P. N. L. Lens, M. Kokkoa, J. Rintala, V. O'Flaherty, U. Z. Ijaz, G. Collins

The paper studies microbial community dynamics in granular, biofilm, and planktonic methanogenic microbiomes treating LCFA-rich wastewater, finding spatial compartmentalization and environmental drivers shaping community assembly.

bioRxiv · Jul 29, 2021Microbiology

Circular Economy of Anaerobic Biofilm Microbiomes: A Meta-Analysis Framework for Re-exploration of Amplicon Sequencing Data

C. Keating, A. Trego, W. Sloan, V. O'Flaherty, U. Z. Z. Ijaz

This study develops a meta-analysis framework to collate and analyze amplicon sequencing data from anaerobic digestion studies, demonstrating methods to improve data integration and diversity analysis.

bioRxiv · Dec 23, 2020 · PreprintMicrobiology

Organic soil amendment with Spent Mushroom Substrate results in fungal colonisation, alters bacterial-fungal co-occurrence patterns and improves plant productivity.

F. S. Paula, E. Tatti, C. Thorn, F. Abram, J. Wilson, V. O'Flaherty

This study examines how spent mushroom substrate affects soil microbial communities and plant productivity over 14 weeks.

bioRxiv · Oct 1, 2019 · PreprintMicrobiology

The potential for polyphosphate metabolism in Archaea and anaerobic polyphosphate formation in Methanosarcina mazei.

F. S. Paula, J. Chin, A. Schnurer, B. Muller, P. Manesiotis, N. Waters, K. A. Macintosh, J. P. Quinn, J. Connolly, F. Abram, J. McGrath, V. O'Flaherty

This study investigates polyphosphate metabolism in Archaea, showing its presence across major taxa and demonstrating anaerobic polyphosphate formation in Methanosarcina mazei under phosphate starvation and repletion.

bioRxiv · Jul 2, 2019Microbiology