Author

Sneha D. Goenka

Stanford UniversityORCID 0000-0002-1716-7769Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alexey KolesnikoviD· 1 shared Andrew W. CarrolliD· 1 shared Benedict PateniD· 1 shared Brandy McNulty· 1 shared Daniel E. CookiD· 1 shared Euan Angus AshleyiD· 1 shared John E. GorzynskiiD· 1 shared Karen H. MigaiD· 1 shared

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2024-2024 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Alexey KolesnikovORCID

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1 paper

Recent·Most cited

BioinformaticsNature CommunicationsPeer-reviewedJul 13, 2024

Local read haplotagging enables accurate long-read small variant calling

Alexey Kolesnikov, Daniel E. Cook, Maria Nattestad…·Kishwar Shafin

This paper introduces a local haplotype approximation method to improve variant calling accuracy across long-read sequencing platforms without increasing computational overhead.

26 citations

whole-genome sequencinglong-read sequencing