Author

Huiqun Yu

East China University of Science and TechnologyORCID 0000-0002-1899-1135Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Assay:protein sequence· 2 Research Focus:protein structure prediction· 2 Approach:transformer / foundation model· 2 Research Focus:benchmarking· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Bozitao ZhongiD· 2 shared Liang HongiD· 2 shared Mingchen LiiD· 2 shared Wanli OuyangiD· 2 shared Xinzhu MaiD· 2 shared Fan JiangiD· 1 shared Guisheng FaniD· 1 shared Liang ZhangiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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2 shared papersBioinformatics

Bozitao ZhongORCID

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2 papers

Recent·Most cited

Bioinformaticsneural information processing systemsPeer-reviewedJan 1, 2025

Venus-MAXWELL: Efficient Learning of Protein-Mutation Stability Landscapes using Protein Language Models

Yuanxi Yu, Fan Jiang, Xinzhu Ma…·Mingchen Li

The paper introduces Venus-MAXWELL, a framework for predicting protein mutant stability using sequence-to-landscape learning, achieving higher accuracy and faster inference than existing methods.

1 citation

protein sequencedeep learning

Bioinformaticsneural information processing systemsPeer-reviewedJan 1, 2024

ProSST: Protein Language Modeling with Quantized Structure and Disentangled Attention

Mingchen Li, Yang Tan, Xinzhu Ma…·Liang Hong

ProSST integrates protein sequences and structures into a Transformer-based model, achieving state-of-the-art performance in mutation effect prediction and downstream tasks.

47 citationstop 1%

protein sequencedeep learning