Author

Kathleen M. Jagodnik

Icahn School of Medicine at Mount SinaiORCID 0000-0002-2755-2097Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Organism:human· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

Avi Ma’ayaniD· 2 shared Denis TorreiD· 2 shared Lily WangiD· 2 shared Moshe C. SilversteiniD· 2 shared Alex Jones· 1 shared Alexander LachmanniD· 1 shared Alexandra B. Keenan· 1 shared Amanda L. CharbonneauiD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Avi Ma’ayanORCID

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2 papers

Recent·Most cited

BioinformaticsCell SystemsPeer-reviewedNov 1, 2019

FAIRshake: toolkit to evaluate the findability, accessibility, interoperability, and reusability of research digital resources

Daniel J. B. Clarke, Lily Wang, Alex Jones…·Avi Ma’ayan

FAIRshake evaluates the FAIRness of research digital resources through community-driven metrics, automated assessments, and visualization tools, revealing opportunities for improvement.

75 citationstop 2%

benchmark studybenchmarking

BioinformaticsNature CommunicationsPeer-reviewedApr 4, 2018

Massive Mining of Publicly Available RNA-seq Data from Human and Mouse

Alexander Lachmann, Denis Torre, Alexandra B. Keenan…·Avi Ma’ayan

The paper develops ARCHS4, a resource that provides uniformly processed RNA-seq data from human and mouse, enabling easier integration and analysis.

699 citationstop 1%

humanmouse