Author

Andrea M. McCollum

Centers for Disease Control and PreventionORCID 0000-0002-9136-818XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:variant calling· 1 Organism:virus· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Christina L. HutsoniD· 2 shared Crystal M. GiganteiD· 2 shared David BlytheiD· 2 shared Dhwani Govil BatraiD· 2 shared Glen R. GallagheriD· 2 shared Hui ZhaoiD· 2 shared Inger K. DamoniD· 2 shared Kimberly WilkinsiD· 2 shared

Activity by Year

2022-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Christina L. HutsonORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Multiple lineages of Monkeypox virus detected in the United States, 2021-2022

Crystal M. Gigante, Bette Korber, Matthew H. Seabolt, Kimberly Wilkins, Whitni Davidson, Agam K. Rao, Hui Zhao, Todd G. Smith, Christine M. Hughes, Faisal Syed Minhaj, Michelle A. Waltenburg, James P. Theiler, Sandra Smole, Glen R. Gallagher, David Blythe, , Yu Li

The paper identifies two lineages of Monkeypox virus in the U.S. in 2021-2022, finding a common ancestor and evidence of APOBEC3 editing in West African strains.

Science · Oct 20, 2022Peer-reviewedGenomics

Genomic deletions and rearrangements in monkeypox virus from the 2022 outbreak, USA

Crystal M. Gigante, Matthew R. Plumb, Ali Ruprecht, Hui Zhao, Vaughn V. Wicker, Kimberly Wilkins, Audrey M. Matheny, Theodora Khan, Whitni Davidson, Mili Sheth, Alex Burgin, Mark Burroughs, Jasmine Padilla, Justin S. Lee, Dhwani Govil Batra, , Yu Li

The paper identifies large genomic deletions and rearrangements in monkeypox virus from the 2022 outbreak in the USA, highlighting potential implications for diagnostic testing.

bioRxiv · Sep 16, 2022 · PreprintGenomics