International Symposium on Medical Information Processing and Analysis (SIPAIM)NeurosciencePeer-reviewed journal article
Comparison of Explainable AI Models for MRI-based Alzheimer's Disease Classification
Tamoghna ChattopadhyayiD, Neha Ann Joshy, Chirag JagadiD, Emma J. GleaveiD, Sophia I. ThomopoulosiD, Yixue FengiD, Julio E. Villalón‐ReinaiD, Emily Laltoo, Himanshu JoshiiD, Ganesan VenkatasubramanianiD, John P. JohniD, Greg Ver SteegiD, José Luis AmbiteiD, Paul M. ThompsoniD
Abstract
Deep learning models based on convolutional neural networks (CNNs) have been used to classify Alzheimers disease or infer dementia severity from 3D T1-weighted brain MRI scans. Here, we examine the value of adding occlusion sensitivity analysis (OSA) and gradient-weighted class activation mapping (Grad-CAM) to these models to make the results more interpretable. Much research in this area focuses on specific datasets such as the Alzheimers Disease Neuroimaging Initiative (ADNI) or National Alzheimers Coordinating Center (NACC), which assess people of North American, predominantly European ancestry, so we examine how well models trained on these data generalize to a new population dataset from India (NIMHANS cohort). We also evaluate the benefit of using a combined dataset to train the CNN models. Our experiments show feature localization consistent with knowledge of AD from other methods. OSA and Grad-CAM resolve features at different scales to help interpret diagnostic inferences made by CNNs.
- organism: human
- assay: imaging
- research focus: cell type annotation
- research focus: clustering
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: deep learning
- approach: statistical model
- Citations
- 5
- FWCI
- 1.48
- Field percentile
- top 15%
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