medRxivGenetic & Genomic MedicinePreprint
Multi-ancestry analysis of POLG variants in Parkinson's disease
Yi Wen TayiD, Inas ElsayediD, Dennis YeowiD, Mikayla James, Pin‐Jui KungiD, Laurel ScreveniD, Allison Ann DilliottiD, Roy N. AlcalayiD, Zih‐Hua FangiD, Ai Huey TaniD, Global Parkinson’s Genetics Program, Carolyn M. SueiD, Lara Mariah LangeiD, María Teresa PeriñániD
Abstract
IntroductionVariants in the polymerase gamma (POLG) gene are associated with a wide range of mitochondrial disorders. Emerging evidence suggests a potential link between POLG variants and Parkinsons disease (PD); yet, results remain inconclusive. ObjectivesTo investigate the genetic spectrum and prevalence of POLG variants in PD across diverse ancestries. MethodsWe leveraged multi-ancestry genetic data from the Global Parkinsons Genetics Program (GP2), including genotyping data from 98,589 and short-read sequencing data from 36,022 individuals. We performed a POLG rare variant screen, case-control association, and gene-level burden analyses. ResultsFive PD cases carried potentially biallelic rare pathogenic/likely pathogenic POLG variants. Additionally, 228 individuals (<1%; 161 PD cases, 28 individuals with other neurological disorders, and 39 controls) carried 34 distinct rare pathogenic/likely pathogenic heterozygous variants, with no significant frequency differences between cases and controls, except for the p.Ala467Thr variant in the European population. The co-inherited pathogenic variants p.Thr251Ile and p.Pro587Leu were present in <1% of both cases and controls, with no significant group differences. Burden and variant-level association analyses showed no association between rare POLG variant burden or common POLG variant enrichment and PD. ConclusionsPOLG variants are overall rare in PD. The identification of rare pathogenic variants among PD cases suggests that POLG-related mitochondrial dysfunction may contribute to PD in isolated instances, particularly under recessive inheritance. Our findings support a role for POLG variants in select cases and underscore the need for larger-scale sequencing and functional studies.
- organism: human
- assay: whole-exome sequencing
- research focus: variant calling
- approach: statistical model
- Citations
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