The shape of aroma: measuring and modeling citrus oil gland distribution
E. J. Amezquita, M. Y. Quigley, T. Ophelders, D. Seymour, E. Munch, D. H. Chitwood
Abstract
O_LICitrus come in diverse sizes and shapes, and play a key role in world culture and economy. Citrus oil glands in particular contain essential oils which include plant secondary metabolites associated with flavor and aroma. Capturing and analyzing nuanced information behind the citrus fruit shape and its oil gland distribution provides a morphology-driven path to further our insight into phenotype-genotype interactions. C_LIO_LIWe investigated the shape of citrus fruit of 51 accessions based on 3D X-ray CT scan reconstructions. Accessions include all three ancestral citrus species, accessions from related genera, and several interspecific hybrids. We digitally separate and compare the size of fruit endocarp, mesocarp, exocarp, and oil gland tissue. Based on the centers of the oil glands, overall fruit shape is approximated with an ellipsoid. Possible oil gland distributions on this ellipsoid surface are explored using directional statistics. C_LIO_LIThere is a strong allometry along fruit tissues; that is, we observe a strong linear relationship between the volume of any pair of major tissues. This suggests that the relative growth of fruit tissues with respect to each other follows a power law. We also observe that on average, glands distance themselves from their nearest neighbor following a square root relationship, which suggests normal diffusion dynamics at play. C_LIO_LIThe observed allometry and square root models point to the existence of biophysical developmental constraints that govern novel relationships between fruit dimensions from both evolutionary and breeding perspectives. Understanding these biophysical interactions prompt an exciting research path on fruit development and breeding. C_LI Societal Impact StatementCitrus are intrinsically connected to human health and culture, including preventing human diseases like scurvy, and inspiring sacred rituals. Citrus fruits come in a stunning number of different sizes and shapes, ranging from small clementines to oversized pummelos, and fruits display a vast diversity of flavors and aromas. These qualities are key in both traditional and modern medicine and the production of cleaning and perfume products. By quantifying and modeling overall fruit shape and oil gland distribution, we can gain further insight into citrus development and the impacts of domestication and improvement on multiple characteristics of the fruit.
02 /Specification & Classification
Click any tag to browse matching papers- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Spatially resolved analysis of longitudinal fruit growth in persimmon (Diospyros kaki) via three-dimensional phenotyping
Akane Kusumi, Soichiro Nishiyama, … Ryutaro Tao·Scientia HorticulturaePeer-reviewed·Sep 1, 2025
- Three-dimensional fruit growth analysis clarifies developmental mechanisms underlying complex shape diversity in persimmon fruit
A. Kusumi, S. Nishiyama, R. Tao·Journal of Experimental BotanyPeer-reviewed·Nov 21, 2023
- Spatially resolved analysis of growth dynamics in pome and drupe fruits of Rosaceae using 3D Gaussian Splatting
Ayame Shimbo, So‐ichiro Nishiyama, … Ryutaro Tao·Plant PhenomicsPeer-reviewed·Jan 9, 2026
- Differences in apple fruit shape are independent of fruit size
Kylie DeViller, Daniel H. Chitwood, … Zoë Migicovsky·The Plant Phenome JournalPeer-reviewed·Jul 9, 2025
- Crosstalk between Ovate Family Proteins, plant hormones, and microtubule dynamics regulating fruit shape
Veredas Coleto‐Alcudia, Beatriz E. García-Gómez, … María José Aranzana·bioRxiv·Feb 19, 2026
- Physiological characterization in a somaclonal mutant for fruit shape derived from persimmon 'Hiratanenashi'
Ayano Horiuchi, Ryusuke Matsuzaki, … Mai F. Minamikawa·The Horticulture JournalPeer-reviewed·Jan 1, 2026