International Conference on Bioinformatics Research and Applications (ICBRA)BioinformaticsPeer-reviewed journal article
Abnormality Detection for Medical Images UsingSelf-Supervision and Negative Samples
Abstract
Recent progress in computer-aided technologies has had a considerable impact on helping experts with a reliable and fast diagnosis of abnormal samples. In particular, self-supervised and self-distillation techniques have advanced automated out-of-distribution (OOD) detection in the image domain. Further improvements in OOD detection have been observed by including negative samples derived from shifting transformations of real images. In this work, we study different ways of creating negative samples for medical images and how effective they are when leveraging them in a self-supervised self-distillation framework. We investigate the impact of various types of negative examples by applying different shifting transformations on samples when they are derived from in-distribution training data, from an auxiliary dataset, or a combination of both. For the case of the auxiliary dataset, we compare the OOD detection performance when auxiliary samples are extracted from an indomain or an out-domain. Our approach uses only data belonging to healthy people during the training procedure and does not require any additional information from labels. We demonstrate the efficiency of our technique by comparing abnormality detection performance on diverse medical datasets, setting new benchmarks for pneumonia, polyp, and glaucoma detection from X-ray, colonoscopy, and ophthalmology images.
- organism: human
- assay: imaging
- research focus: differential expression
- approach: deep learning
- approach: contrastive learning
- Citations
- 2
- FWCI
- 0.36
- Field percentile
- top 41%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Pneumonia Detection with Semantic Similarity Scores
Rahil Gholamipoor, Nima Rafiee, Markus Kollmann·IEEE International Symposium on Biomedical Imaging (ISBI)Peer-reviewed·Mar 28, 2022
- Self-supervised retinal thickness prediction enables deep learning from unlabeled data to boost classification of diabetic retinopathy
Olle Holmberg, Niklas Köhler, … Fabian Joachim Theis·Nature Machine IntelligencePeer-reviewed·Nov 9, 2020
- Effective Representation Learning via The Integrated Self-Supervised Pre-training models of StyleGAN2-ADA and DINO for Colonoscopy Images
Jong‐Yeup Kim, Gayrat Tangriberganov, … Sun Moon Kim·bioRxiv·Jun 15, 2022
- Assessment of the need for separate test set and number of medical images necessary for deep learning: a sub-sampling study
Ariel Rokem, Yue Wu, Aaron Lee·bioRxiv·Oct 1, 2017
- Feasibility of Automated Deep Learning Design for Medical Image Classification by Healthcare Professionals with Limited Coding Experience
Livia Faes, Siegfried K. Wagner, … Pearse Andrew Keane·bioRxiv·May 27, 2019
- Enhancing Biomedical Optical Volumetric Imaging via Self-Supervised Orthogonal Learning
Yuanjie Gu, Yiqun Wang, … Biqin Dong·Science AdvancesPeer-reviewed·Apr 15, 2026