bioRxivEcologyPreprint
Biophysical and physiological causes of coral reef microbialization
C. B. Silveira, T. N. F. Roach, H. Villela, A. Barno, B. Reyes, E. Rubio-Portillo, T. Le, S. Mead, M. Hatay, A. Luque, L. Wegley-Kelly, M. Vermeij, B. Bailey, Y. Takeshita, A. Haas, F. Rohwer
Abstract
Coral reefs are declining globally as their primary producer communities shift from stony coral to fleshy macroalgae dominance. Previously, we have shown that the rise of fleshy macroalgae produces dissolved organic carbon (DOC) that lead to microbialization and coral death. Here we test the hypothesis that the biophysical cause of bacterial biomass accumulation is a relative decrease in electron acceptors relative to electron donors due to O2 loss from macroalgae. We show that 37 % of photosynthetic O2 produced by reef fleshy macroalgae is lost in the form of gas through ebullition from algae surfaces. O2 loss increases DOC:O2 ratios, decoupling the photosynthetically fixed carbon from oxidative potential for respiration. This biogeochemical environment drives heterotrophic microbes to increase cell-specific DOC consumption and cell sizes, accumulating biomass. In contrast, corals do not lose oxygen and support the growth of smaller and fewer bacteria. In situ biomass and metagenomic analyses of 87 reefs across the Pacific and Caribbean show that on algae-dominated reefs bacteria accumulate organic carbon through a Warburg-like increase in aerobic glycolytic metabolism. Because of its biophysical basis, microbialization is predicted to occur in other marine ecosystems shifting primary producer assemblages, such as planktonic communities in warming and acidifying conditions.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Coral hosts actively accumulate inorganic carbon for Symbiodiniaceae to maintain symbiotic relationships
Boya Zhang, Si Tang, … Zhonghua Cai·bioRxiv·May 31, 2024
- Shifts in the coral microbiome in response to in situ experimental deoxygenation
R. D. Howard, M. Schul, … J. L. Meyer·bioRxiv·Apr 6, 2023
- Evidence for a biological source of widespread, reproducible nighttime oxygen spikes in tropical reef ecosystems has implications for coral health
S. K. Calhoun, A. F. Haas, … J. E. Smith·bioRxiv·Mar 8, 2020
- Microbial Community Dynamics Provide Evidence for Hypoxia During a Coral Reef Mortality Event
S. M. Doyle, M. J. Self, … J. B. Sylvan·bioRxiv·Feb 24, 2022
- Water-mediated productivity dynamics in shifting coral reef communities
Jana Vetter, Kara Elena Engelhardt, … Maren Ziegler·bioRxiv·Apr 21, 2026
- Vibrio spp. dominate the microbiome of the endosymbiotic algae in healthy coral tissues
Abigail L. Smith, Kendall N. Jung, … Anny Cárdenas·bioRxiv·Aug 7, 2025