Communications BiologyNeurosciencePeer-reviewed journal article
Structural Reorganization Following a Brain Tumor: A Machine Learning Study Considering Desynchronized Functional Oscillations
Joan Falcó-RogetiD, Alberto CacciolaiD, Fabio SambataroiD, Alessandro CrimiiD
Abstract
Neuroimaging studies have allowed for non-invasive mapping of brain networks in brain tumors. Although tumor core and oedema are easily identifiable using standard MRI acquisitions, imaging studies often neglect signals, structures and functions within their presence. Therefore, both functional and diffusion signals, as well as their relationship with global patterns of connectivity reorganization, are poorly understood. Here, we explore functional activity and the structure of white matter fibers considering the contribution of the whole tumor in a surgical context. First, we find that intra-tumor signals do exist and are correlated with alterations present both in healthy tissue and resting-state networks. Second, we propose a fiber tracking pipeline capable of using anatomical information while still reconstructing bundles in tumoral and peritumoral tissue. Finally, using machine learning and healthy anatomical information, we predict structural rearrangement after surgery given the preoperative brain network. The generative model also disentangles complex patterns of connectivity reorganization for different types of tumors. Overall, we show the importance of carefully designing studies including MR signals within damaged brain tissues, as they exhibit and relate to non-trivial patterns of both structural and functional (dis-)connections or activity.
- organism: human
- assay: bulk RNA-seq
- research focus: trajectory inference
- approach: machine learning (classical)
- Citations
- 23
- FWCI
- 5.58
- Field percentile
- top 3%
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