Scientific ReportsNeurosciencePeer-reviewed journal article
A-GHN: Attention-based Fusion of Multiple GraphHeat Networks for Structural to Functional Brain Mapping
Subba Reddy OotaiD, Archi Yadav, Arpita Dash, Raju Surampudi BapiiD, Avinash Kumar SharmaiD
Abstract
Over the last decade, there has been growing interest in learning the mapping from structural connectivity (SC) to functional connectivity (FC) of the brain. The spontaneous fluctuations of the brain activity during the restingstate as captured by functional MRI (rsfMRI) contain rich non-stationary dynamics over a relatively fixed structural connectome. Among the modeling approaches, graph diffusion-based methods with single and multiple diffusion kernels approximating static or dynamic functional connectivity have shown promise in predicting the FC given the SC. However, these methods are computationally expensive, not scalable, and fail to capture the complex dynamics underlying the whole process. Recently, deep learning methods such as GraphHeat networks along with graph diffusion have been shown to handle complex relational structures while preserving global information. In this paper, we propose a novel attention-based fusion of multiple GraphHeat networks (A-GHN) for mapping SC-FC. A-GHN enables us to model multiple heat kernel diffusion over the brain graph for approximating the complex Reaction Diffusion phenomenon. We argue that the proposed deep learning method overcomes the scalability and computational inefficiency issues but can still learn the SC-FC mapping successfully. Training and testing were done using the rsfMRI data of 100 participants from the human connectome project (HCP), and the results establish the viability of the proposed model. Furthermore, experiments demonstrate that A-GHN outperforms the existing methods in learning the complex nature of human brain function.
- Citations
- 5
- FWCI
- 1.21
- Field percentile
- top 26%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Exploring the Brain Characteristics of Structure-informed Functional Connectivity through Graph Attention Network
Zifan Wang, P.-J. Toussaint, … Xi Jiang·bioRxiv·Nov 30, 2023
- Diffusion Wavelets on Connectome: Localizing the Sources of Diffusion Mediating Structure-Function Mapping Using Graph Diffusion Wavelets
Chirag Jain, Sravanthi Upadrasta Naga Sita, … Raju Surampudi Bapi·bioRxiv·Sep 7, 2024
- Prediction of brain functions from structural connectome using graph neural network
- Joint subject-identification and task-decoding from inferred functional brain graphs via a multi-task neural network
Elif Sema Balcioglu, Berkay Döner, … Hamid Behjat·IEEE International Symposium on Biomedical Imaging (ISBI)Peer-reviewed·May 27, 2024
- Graph neural fields: a framework for spatiotemporal dynamical models on the human connectome
Marco Aqil, Selen Atasoy, … Rikkert Hindriks·PLoS Computational BiologyPeer-reviewed·Jan 28, 2021
- A Deep Graph Neural Network Architecture for Modelling Spatio-temporal Dynamics in resting-state functional MRI Data
Tiago Azevedo, Alexander Campbell, … Nicola Toschi·Medical Image AnalysisPeer-reviewed·May 7, 2022