eLifeGenomicsPeer-reviewed journal article
Landscape genomic prediction for restoration of a Eucalyptus foundation species under climate change
Megan A. SuppleiD, Jason G. BraggiD, Linda BroadhurstiD, Adrienne B. NicotraiD, Margaret Mary ByrneiD, Rose L. AndrewiD, Abigail Widdup, Nicola Aitken, Justin BorevitziD
Abstract
As species face rapid environmental change, we can build resilient populations through restoration projects that incorporate predicted future climates into seed sourcing decisions. Eucalyptus melliodora is a foundation species of a critically endangered community in Australia that is a target for restoration. We examined patterns of genomic and phenotypic variation to make empirical based recommendations for seed sourcing. We examined isolation by distance and isolation by environment, determining gene flow up to 500 km and associations with environmental variables. Climate chamber studies revealed extensive phenotypic variation both within and among sampling sites, but no site-specific differentiation in phenotypic plasticity. Overall our results suggest that seed can be sourced broadly across the landscape, providing ample diversity for adaptation to environmental change. Application of our landscape genomic model to E. melliodora restoration projects can identify genomic variation suitable for predicted future climates, thereby increasing the long term probability of successful restoration.
- organism: plant (other)
- assay: whole-genome sequencing
- research focus: variant calling
- approach: statistical model
- Citations
- 72
- FWCI
- 4.45
- Field percentile
- top 5%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Closely-related tree species with overlapping ranges exhibit divergent adaptation to climate
J. W. Whale, C. W. Ahrens, … P. D. Rymer·bioRxiv·Nov 8, 2021
- Landscape drivers of genomic diversity and divergence in woodland Eucalyptus
K. D. Murray, J. K. Janes, … J. O. Borevitz·bioRxiv·Apr 1, 2019
- Complex Genomic Structural Variation Underlies Climate Adaptation across Eucalyptus species
Zixiong Zhuang, Scott Ferguson, … Ashley Jones·bioRxiv·Mar 6, 2026
- Implications of genetic heterogeneity for plant translocation during ecological restoration
T. M. Crow, C. A. Buerkle, … K. Hufford·bioRxiv·Jan 28, 2020
- Harnessing landscape genomics to evaluate genomic vulnerability and future climate resilience in an East Asia perennial
Li Feng, Congying Wang, … Xumei Wang·Molecular EcologyPeer-reviewed·Oct 3, 2025
- Genomics-driven monitoring of Fraxinus latifolia (Oregon Ash) for conservation and EAB-resistance breeding
Anthony E. Melton, Trevor M. Faske, … Jill A. Hamilton·bioRxiv·Aug 22, 2024