bioRxivMicrobiology
Evolution with a seed bank: the population genetic consequences of microbial dormancy
Abstract
Dormancy is a bet-hedging strategy that allows organisms to persist through conditions that are sub-optimal for growth and reproduction by entering a reversible state of reduced metabolic activity. Dormancy allows a population to maintain a reservoir of genetic and phenotypic diversity (i.e., a seed bank) that can contribute to the long-term survival of a population. This strategy can be potentially adaptive and has long been of interest to ecologists and evolutionary biologists. However, comparatively little is known about how dormancy influences the fundamental evolutionary forces of genetic drift, mutation, selection, recombination, and gene flow. Here, we investigate how seed banks affect the processes underpinning evolution by reviewing existing theory, implementing novel simulations, and determining how and when dormancy can influence evolution as a population genetic process. We extend our analysis to examine how seed banks can alter macroevolutionary processes, including rates of speciation and extinction. Through the lens of population genetic theory, we can understand the extent that seed banks influence microbial evolutionary dynamics.
- research focus: chromatin & epigenetic regulation
- research focus: development & morphogenesis
- research focus: ecology & biodiversity
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Seed banks alter the molecular evolutionary dynamics of Bacillus subtilis
W. R. Shoemaker, E. Polezhaeva, … J. T. Lennon·bioRxiv·Oct 5, 2021
- Coevolution with a seed bank
D. A. Schwartz, W. R. Shoemaker, … J. T. Lennon·bioRxiv·Feb 8, 2023
- Stabilization of fluctuating population dynamics via the evolution of dormancy
Zachary R. Miller, David A. Vasseur, Pincelli M. Hull·Ecology LettersPeer-reviewed·May 1, 2025
- Evolution of reduced dormancy during range expansions
J. M. Travis, P. Mynard, G. Bocedi·bioRxiv·Oct 11, 2021
- Seed dormancy increased population persistence in permissive environments, but not in stressful environments in an annual plant.
Brandie Quarles-Chidyagwai, Kathleen Donohue·Annals of BotanyPeer-reviewed·Jun 24, 2026
- Bayesian phylodynamic inference of population dynamics with dormancy
Lorenzo Cappello, Wai Tung ‘Jack’ Lo, … Jaehee Kim·Proceedings of the National Academy of SciencesPeer-reviewed·May 2, 2025