NeuroImageNeurosciencePeer-reviewed journal article
Empirical Transmit Field Bias Correction of T1w/T2w Myelin Maps
Matthew F. GlasseriD, Timothy S. CoalsoniD, Michael P. HarmsiD, Junqian XuiD, Graham L. BaumiD, Joonas A. AutioiD, Edward J. AuerbachiD, Douglas N. GreveiD, Essa S. YacoubiD, David C. Van EsseniD, Nicholas A. BockiD, Takuya HayashiiD
Abstract
T1-weighted divided by T2-weighted (T1w/T2w) myelin maps were initially developed for neuroanatomical analyses such as identifying cortical areas, but they are increasingly used in statistical comparisons across individuals and groups with other variables of interest. Existing T1w/T2w myelin maps contain radiofrequency transmit field (B1+) biases, which may be correlated with these variables of interest, leading to potentially spurious results. Here we propose two empirical methods for correcting these transmit field biases using either explicit measures of the transmit field or alternatively a pseudo-transmit approach that is highly correlated with the transmit field at 3T. We find that the resulting corrected T1w/T2w myelin maps are both better neuroanatomical measures (e.g., for use in cross-species comparisons), and more appropriate for statistical comparisons of relative T1w/T2w differences across individuals and groups (e.g., sex, age, or body-mass-index) within a consistently acquired study at 3T. We recommend that investigators who use the T1w/T2w approach for mapping cortical myelin use these B1+ transmit field corrected myelin maps going forward.
- Citations
- 67
- FWCI
- 7.10
- Field percentile
- top 2%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Non-negative least squares computation for in vivo myelin mapping using simulated multi-echo spin-echo T2 decay data
V. Wiggermann, I. M. Vavasour, … A. Rauscher·NMR in BiomedicinePeer-reviewed·Mar 2, 2020
- Charting Cortical-Layer Specific Area Boundaries Using Gibbs Ringing Attenuated T1w/T2w-FLAIR Myelin MRI
Joonas A. Autio, Akiko Uematsu, … Takuya Hayashi·Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and ExhibitionPeer-reviewed·Sep 16, 2025
- Quantitative T1-relaxation corrected metabolite mapping of 12 metabolites in the human brain at 9.4 T
Andrew Martin Wright, Saipavitra Murali‐Manohar, A Henning·NeuroImagePeer-reviewed·Sep 1, 2022
- Effects of MP2RAGE B1+ sensitivity on inter-site T1 reproducibility and morphometry at 7T
Roy A.M. Haast, Jonathan C. Lau, … ALI RAZA KHAN·NeuroImagePeer-reviewed·Sep 17, 2020
- Estimating the effect of a scanner upgrade on measures of grey matter structure for longitudinal designs
Evelyn Medawar, Ronja Thieleking, … Frauke Beyer·PLoS ONEPeer-reviewed·Oct 5, 2021
- Quantitative Impact of Coil Misalignment and Misplacement in Transcranial Magnetic Stimulation
Max Koehler, Thomas Kammer, Stefan M. Goetz·bioRxiv·Nov 18, 2023