Author

Abhi Srikanth

Johns Hopkins University Applied Physics Laboratory

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:human· 1 Organism:mouse· 1 Research Focus:phylogenetics / evolution· 1 Research Focus:variant calling· 1 Organism:virus· 1

Frequent Co-Authors

Beth K. MutaiiD· 1 shared Brian B. Merritt· 1 shared Erik A. KarlssoniD· 1 shared Gathii KimitaiD· 1 shared George AwindaiD· 1 shared Hannah Gooden· 1 shared Irina Maljkovic BerryiD· 1 shared Jeremy D. RatcliffiD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Beth K. MutaiORCID

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2 papers

Recent·Most cited

Improved Resolution of Highly Pathogenic Avian Influenza Virus Haemagglutinin Cleavage Site Using Oxford Nanopore R10 Sequencing Chemistry

Jeremy D. Ratcliff, Brian B. Merritt, Hannah Gooden, Jurre Y. Siegers, Abhi Srikanth, Sokhoun Yann, Sonita Kol, Sarath Sin, Songha Tok, Erik A. Karlsson, Peter Thielen

This study compares Oxford Nanopore R9.4.1 and R10.4.1 sequencing chemistries for resolving the hemagglutinin cleavage site in avian influenza viruses, finding improved accuracy with R10.4.1.

bioRxiv · Sep 30, 2023 · PreprintGenomics

The evolution of dengue-2 viruses in Malindi, Kenya and greater East Africa: epidemiological and immunological implications

Simon Pollett, Gathii Kimita, Katherine Figueroa, Wiriya Rutvisuttinunt, Abhi Srikanth, Josphat Nyataya, Beth K. Mutai, George Awinda, Richard G. Jarman, Irina Maljkovic Berry, John Njenga Waitumbi

The paper analyzes DENV-2 virus evolution in Kenya and East Africa, finding that the 2017 outbreak strain had circulated for years and showed unique selection pressures and potential immunogenic sites.

Infection Genetics and Evolution · Nov 5, 2020Peer-reviewedGenomics