Author

Ahmet Aksit

Izmir Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Arda AskiniD· 1 shared Cagatay SahiniD· 1 shared Emre KılıçiD· 1 shared Gokhan Karahanogullari· 1 shared H. Atakan EkiziD· 1 shared M Mert Ozgur· 1 shared Muhammet Emre KusiD· 1 shared Ryan M. O’ConnelliD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Arda AskinORCID

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1 paper

Recent·Most cited

A novel visual analysis interface enables integrative analyses of cancer transcriptomics data and iden-tifies potential markers of immunotherapy response via machine learning.

Muhammet Emre Kus, Cagatay Sahin, Emre Kılıç, Arda Askin, M Mert Ozgur, Gokhan Karahanogullari, Ahmet Aksit, Ryan M. O’Connell, H. Atakan Ekiz

The paper introduces TCGEx, a web-based tool for analyzing cancer transcriptomics data, identifies microRNAs and cytokines linked to immunotherapy response in melanoma.

EMBO Reports · Mar 3, 2025Peer-reviewedBioinformatics