Author

Aishwarya Budhkar

Department of Computer Science, Indiana University Bloomington, Indiana, USA;Primary ORCID profile (0009-0003-9317-4519 · 3 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Aishwarya BudhkariD3 papers · Indiana University Bloomington

Biology Disciplines

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Bioinformatics· 1

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Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Jing Su· 1 shared Qianqian SongiD· 1 shared Sen Guo· 1 shared Xuhong Zhang· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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4 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Jing Su

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1 paper

Recent·Most cited

irAEGIS: Pathway-guided interpretable prediction of immune-related adverse events

Aishwarya Budhkar, Sen Guo, Xuhong Zhang, Jing Su, Qianqian Song

irAEGIS predicts immune-related adverse events from pre-treatment scRNA-seq data using a pathway-guided interpretable model, outperforming existing methods and identifying biologically relevant immune programs.

bioRxiv · Nov 3, 2026 · PreprintBioinformatics