Enformer-Based Phylogenetic Tree Reconstruction
Alessandra Capitanio, Nicolò Stranieri, Alessio Enderti, Simone G. Riva, Jim R. Hughes
The paper uses Enformer to reconstruct phylogenetic trees across multiple species by analyzing regulatory signals from orthologous genes, showing strong correlation with known evolutionary relationships.
bioRxiv · Jun 6, 2026 · PreprintBioinformatics