Author

Alice Coucke

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:protein sequence· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Simona Cocco· 2 shared Eleonora De Leonardis· 1 shared Francesco Oteri· 1 shared Guido UguzzoniiD· 1 shared John P Barton· 1 shared Martin WeigtiD· 1 shared Remi Monasson· 1 shared

Activity by Year

2016-2016 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 13 mutual co-author links

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2 shared papersBiophysics

Simona Cocco

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2 papers

Recent·Most cited

Direct coevolutionary couplings reflect biophysical residue interactions in proteins

Alice Coucke, Guido Uguzzoni, Francesco Oteri, Simona Cocco, Remi Monasson, Martin Weigt

This study shows that coupling matrices from DCA contain quantitative physico-chemical information about amino-acid interactions, validated using synthetic data.

bioRxiv · Jun 29, 2016Biophysics

ACE: adaptive cluster expansion for maximum entropy graphical model inference

John P Barton, Eleonora De Leonardis, Alice Coucke, Simona Cocco

ACE infers Ising/Potts models from correlation data with high accuracy and avoids overfitting by constructing sparse interaction networks.

bioRxiv · Mar 18, 2016Bioinformatics