Benchmarking Chemical, Genetic, and Cell Line Encodings for Cancer Perturbation Response Prediction
Valentyna Zinchenko, Andreas Schlicker, Roman Kurilov, Alison Pouplin, Santiago Villalba, Marc Horlacher
The paper benchmarks encoding methods for chemical, genetic, and cell line perturbations to predict cancer cell viability and gene dependency.
bioRxiv · Dec 17, 2025 · PreprintBioinformatics