varVAMP: automated pan-specific primer design for tiled full genome sequencing and qPCR of highly diverse viral pathogens.
Jonas Fuchs, Johanna Kleine, Mathias Schemmerer, Julian Kreibich, Wolfgang Maier, Namuun Battur, Thomas Krannich, Somayyeh Sedaghatjoo, Lena Jaki, Anastasija Maks, Christina Boehm, Carina Wilhelm, Jessica Schulze, Christin Mache, Elischa Berger, , Marcus Panning
varVAMP designs pan-specific primers for tiled sequencing and qPCR of diverse viruses, ensuring specificity through minimal variability regions and degenerate nucleotides.
bioRxiv · May 8, 2024 · PreprintBioinformatics