Author

Anika Mantripragada

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Genomics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Anshul Bharat KundajeiD· 1 shared Georgi K. MarinoviD· 1 shared Haiyuan YuiD· 1 shared Jacob Matthew SchreiberiD· 1 shared John T. LisiD· 1 shared Kelly CochraniD· 1 shared Melody Yin· 1 shared Sagar R ShahiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperGenomics

Anshul Bharat KundajeORCID

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1 paper

Recent·Most cited

Dissecting the cis-regulatory syntax of transcription initiation with deep learning

Kelly Cochran, Melody Yin, Anika Mantripragada, Jacob Matthew Schreiber, Georgi K. Marinov, Sagar R Shah, Haiyuan Yu, John T. Lis, Anshul Bharat Kundaje

The paper trains a deep learning model to predict transcription initiation from DNA sequences, revealing shared cis-regulatory logic and epistatic interactions across promoters and enhancers.

bioRxiv · May 28, 2024 · PreprintGenomics