Beyond pseudotime: Following T-cell maturation in single-cell RNAseq time series
David S. Fischer, Anna Fiedler, Eric M. Kernfeld, Ryan M. J. Genga, Aimée Bastidas-Ponce, Mostafa Bakhti, Heiko Lickert, Jan Hasenauer, René Maehr, Fabian Joachim Theis
The paper introduces pseudodynamics, a framework to model real-time cellular development using time-series and genetic knock-out data, applied to thymic T-cell maturation.
Nature Biotechnology · Apr 1, 2019Peer-reviewedBioinformatics