A General Framework for Injecting BiophysicalPriors into Protein Embeddings
Jonathan D. Feldman, Antoine Maechler, Dianzhuo Wang, Eugene I. Shakhnovich
This paper introduces a framework that integrates biophysical priors into protein embeddings to improve DeltaDeltaG prediction, showing that general-purpose encoders can outperform specialized models.
bioRxiv · Feb 23, 2026 · PreprintBioinformatics