Author

Arda Akdemir

Institute of Medical Science, The University of Tokyo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Assay:long-read sequencing· 1 Research Focus:variant calling· 1 Approach:variational autoencoder· 1

Frequent Co-Authors

Georg TremmeliD· 1 shared Rui YamaguchiiD· 1 shared Satoru MiyanoiD· 1 shared Seiya ImotoiD· 1 shared Tetsuo ShibuyaiD· 1 shared Yaozhong ZhangiD· 1 shared

Activity by Year

2019-2019 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Georg TremmelORCID

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1 paper

Recent·Most cited

Nanopore base-calling from a perspective of instance segmentation

Yaozhong Zhang, Arda Akdemir, Georg Tremmel, Seiya Imoto, Satoru Miyano, Tetsuo Shibuya, Rui Yamaguchi

This paper introduces a base-calling method for nanopore sequencing by framing it as a one-dimensional segmentation task, achieving competitive accuracy compared to existing methods.

bioRxiv · Jul 8, 2019 · PreprintBioinformatics