Author

Arunima Mandal

Florida State University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:protein structure prediction· 2 Research Focus:benchmarking· 1 Research Focus:protein design· 1 Assay:protein sequence· 1 Assay:protein structure· 1 Research Focus:sequence-to-function modeling· 1

Frequent Co-Authors

Jinfeng ZhangiD· 2 shared Xiuwen LiuiD· 2 shared Yuan ZhangiD· 2 shared Chun‐Chao Lo· 1 shared Feng PaniD· 1 shared Kevin CuiiD· 1 shared

Activity by Year

2021-2021 · peak 2/yr

Co-Author Collaboration Network

6 top collaborators · 13 mutual co-author links

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2 shared papersBioinformatics

Jinfeng ZhangORCID

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2 papers

Recent·Most cited

ProDCoNN-server: a web server for protein sequence prediction and design from a three-dimensional structure

Yuan Zhang, Arunima Mandal, Kevin Cui, Xiuwen Liu, Jinfeng Zhang

ProDCoNN-server predicts and designs protein sequences from 3D structures using deep learning models, offering fast and accurate results with visualization tools.

bioRxiv · Nov 4, 2021 · PreprintBioinformatics

Protein loop modeling and refinement using deep learning models

Feng Pan, Yuan Zhang, Chun‐Chao Lo, Arunima Mandal, Xiuwen Liu, Jinfeng Zhang

This paper introduces two deep learning models for protein loop modeling that improve accuracy without relying on multiple sequence alignments.

bioRxiv · Nov 3, 2021 · PreprintBioinformatics