SimMS: A GPU-Accelerated Cosine Similarity implementation for Tandem Mass Spectrometry
Tornike Onoprishvili, Jui-Hung Yuan, Kamen Petrov, Vijay Ingalalli, Lila Khederlarian, Niklas Leuchtenmüller, Sona Chandra, Aurelien Duarte, Andreas Bender, Yoann Gloaguen
SimMS provides a GPU-accelerated cosine similarity method for tandem mass spectrometry with a 1000-fold speedup while maintaining high accuracy.
Bioinformatics · Feb 18, 2025Peer-reviewedBioinformatics