The single-species metagenome: subtyping Staphylococcus aureus core genome sequences from shotgun metagenomic data
Sandeep J Joseph, Ben Li, Robert A Petit, Zhaohui Qin, Lyndsey Darrow, Timothy D Read
The paper develops a method to subtype Staphylococcus aureus from metagenomic data, finding common subtypes and risk factors for carriage.
bioRxiv · Nov 5, 2015Genomics