Author

C. Duvallet

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:statistical model· 3 Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1

Frequent Co-Authors

E. J. Alm· 2 shared A. Lee· 1 shared A. N. Zhang· 1 shared C. Dai· 1 shared C. Ratti· 1 shared E. Alm· 1 shared K. Freer· 1 shared K. Jamil· 1 shared

Activity by Year

2017-2019 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersMicrobiology

E. J. Alm

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3 papers

Recent·Most cited

Aerodigestive sampling reveals altered microbial exchange between lung, oropharyngeal, and gastric microbiomes in children with impaired swallow function

C. Duvallet, K. Larson, S. Snapper, S. Iosim, A. Lee, K. Freer, K. May, E. Alm, R. Rosen

This study examines microbial exchange between lung, oropharyngeal, and gastric microbiomes in children with impaired swallow function, finding increased similarity between lung and oropharyngeal microbiomes in those with aspiration.

bioRxiv · Apr 2, 2019Microbiology

Multi-site sampling and risk prioritization reveals the public health relevance of antibiotic resistance genes found in wastewater environments

C. Dai, C. Duvallet, A. N. Zhang, M. G. Matus, N. Ghaeli, S. Park, N. Endo, S. Isazadeh, K. Jamil, C. Ratti, E. J. Alm

This study assesses the public health risk of antibiotic resistance genes in wastewater by combining metagenomic analysis with risk prioritization across multiple countries.

bioRxiv · Feb 28, 2019 · PreprintMicrobiology

Meta Analysis Of Microbiome Studies Identifies Shared And Disease-Specific Patterns

C. Duvallet, S. M. Gibbons, T. Gurry, R. A. Irizarry, E. J. Alm

The paper performs a meta-analysis of microbiome studies to identify shared and disease-specific patterns, finding common core microbes associated with multiple diseases.

bioRxiv · May 8, 2017Microbiology