Author

Catherine K. Foo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:machine learning (classical)· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Evan McCartney‐MelstadiD· 1 shared James HaniD· 1 shared Ke Bi· 1 shared

Activity by Year

2021-2021 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperBioinformatics

Evan McCartney‐MelstadORCID

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1 paper

Recent·Most cited

VCFcontam: A Machine Learning Approach to Estimate Cross-Sample Contamination from Variant Call Data

Evan McCartney‐Melstad, Ke Bi, James Han, Catherine K. Foo

This paper introduces a machine learning method to estimate cross-sample contamination from variant call data using a support vector regression model trained on simulated datasets.

bioRxiv · Mar 12, 2021 · PreprintBioinformatics