Improving generalizability for MHC-I binding peptide predictions through geometric deep learning
Dario F. Marzella, Giulia Crocioni, Tadija Radusinović, Daniil Lepikhov, Heleen Severin, Dani L. Bodor, Daniel T. Rademaker, ChiaYu Lin, Sonja Georgievska, Nicolas Renaud, Amy L. Kessler, Pablo López‐Tarifa, Sonja I. Buschow, Erik J. Bekkers, Li C. Xue
This paper improves MHC-I binding peptide prediction generalizability using geometric deep learning, outperforming sequence-based methods without binding affinity data.
bioRxiv · Dec 4, 2023 · PreprintBioinformatics