Using phylogenetic summary statistics for epidemiological inference
Rafael C. Núñez, Gregory R. Hart, Michael Famulare, Christopher Lorton, Joshua T. Herbeck
This study evaluates 74 phylogenetic summary statistics through simulation to assess their relationship to epidemiological quantities and computational efficiency, offering guidelines for their use in genomic epidemiology.
bioRxiv · Aug 7, 2024 · PreprintGenetics