PertDiffBench: Benchmarking Diffusion Models for Single-Cell Perturbation Response Prediction
zj Song, Yujia Xiang, W T Jin, Jiangmeng Li, Chuxiong Sun, Linhai Xie
PertDiffBench benchmarks diffusion models for predicting transcriptional responses to perturbations in single-cell and bulk RNA-seq data, showing mixed performance across different tasks and settings.
bioRxiv · Jun 13, 2026 · PreprintBioinformatics