Author

Clay Ihle

Hope College

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Aaron A. BestiD· 1 shared Adam D. Slater· 1 shared Benjamin N. Turner· 1 shared Bruce Parrello· 1 shared Francesco S. MoeniD· 1 shared James J. DavisiD· 1 shared Marcus NguyeniD· 1 shared Zachary C. ElmoreiD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Aaron A. BestORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

Predicting Protein-encoding Gene Content in Escherichia coli Genomes

Marcus Nguyen, Zachary C. Elmore, Clay Ihle, Francesco S. Moen, Adam D. Slater, Benjamin N. Turner, Bruce Parrello, Aaron A. Best, James J. Davis

This study builds machine learning classifiers to predict variable gene presence in E. coli genomes, achieving high accuracy for most gene families, including poorly annotated and horizontally transferred genes.

bioRxiv · Jan 17, 2023 · PreprintBioinformatics