Author

D. Q. Le

University of California, Los Angeles

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

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Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:protein sequence· 1 Research Focus:protein structure prediction· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Ankith Uppunda· 1 shared Dat DuongiD· 1 shared Eleazar EskiniD· 1 shared Jingyi Jessica LiiD· 1 shared Kai-Wei ChangiD· 1 shared Lisa GaiiD· 1 shared

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2020-2020 · peak 1/yr

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1 shared paperBioinformatics

Ankith Uppunda

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1 paper

Recent·Most cited

Annotating Gene Ontology terms for protein sequences with the Transformer model

Dat Duong, Lisa Gai, Ankith Uppunda, D. Q. Le, Eleazar Eskin, Jingyi Jessica Li, Kai-Wei Chang

The paper introduces a Transformer-based model for annotating Gene Ontology terms in protein sequences, showing improved accuracy over CNN-based methods and incorporating additional features like BLAST motifs and structural data.

bioRxiv · Jan 31, 2020 · PreprintBioinformatics