MicrobioRel: A Set of Datasets for Microbiome Relation Extraction
Oumaima El Khettari, Daniel Batteux, Solen Quiniou, Samuel Chaffron
The paper introduces MicrobioRel, two datasets for microbiome relation extraction, and evaluates models for this task, finding PubMedBERT to be effective.
bioRxiv · Aug 3, 2025 · PreprintBioinformatics