MicNet Toolbox: visualizing and deconstructing a microbial network
Natalia Favila, David Madrigal‐Trejo, Daniel Legorreta, Jazmín Sánchez-Pérez, Laura Espinosa-Asuar, Valeria Souza
The paper introduces MicNet Toolbox, a python tool for visualizing microbial communities and analyzing co-occurrence networks using UMAP, HDBSCAN, and an enhanced SparCC algorithm.
bioRxiv · Nov 11, 2021 · PreprintBioinformatics