Author

David Farrugia

University of Malta

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:software / tool· 1

Frequent Co-Authors

David Čechák· 1 shared Dimosthenis TzimotoudisiD· 1 shared Eva MarsalkovaiD· 1 shared Katarína GrešováiD· 1 shared Panagiotis AlexiouiD· 1 shared Stephanie SammutiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

David Čechák

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1 paper

Recent·Most cited

miRBind2 enables sequence-only prediction of miRNA binding and transcript repression

David Čechák, Dimosthenis Tzimotoudis, Stephanie Sammut, Katarína Grešová, Eva Marsalkova, David Farrugia, Panagiotis Alexiou

miRBind2 is a deep learning model that predicts miRNA binding and transcript repression from sequence, outperforming existing methods with fewer parameters.

Bioinformatics · Jun 18, 2026Peer-reviewedBioinformatics