VNTR prediction on sequence characteristics using long-read annotation and validation by short-read pileup
Diederik Cames van Batenburg, Jasper Linthorst, Henne H. Holstege, Marcel J. T. Reinders
The paper predicts VNTRs using a random forest classifier based on long-read sequencing data and validates predictions with short-read pileup analysis across 17 genomes.
bioRxiv · Jul 17, 2020 · PreprintBioinformatics