All-Atom Structure Tokenizer: AtomLM-9b for Biomolecular Structure Prediction
Jiaxian Yan, Dongchu Xie, Zhicai Wang, Mingyang Xu, Zaixi Zhang
The paper introduces AtomLM-9b, a language model using an all-atom structure tokenizer to predict protein structures with performance comparable to AlphaFold 3.
bioRxiv · Nov 4, 2026 · PreprintBioinformatics