Author

F. Cupaioli

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:deconvolution· 1 Approach:deep learning· 1 Organism:mouse· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Ivan MerelliiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

1 paper

Recent·Most cited

PRISM: probabilistic cell-type resolution with integrated spatial modelling for simultaneous ambient RNA decontamination and doublet correction in spatial transcriptomics

F. Cupaioli, Ivan Merelli

PRISM simultaneously decontaminates ambient RNA and corrects doublets in spatial transcriptomics data, achieving high accuracy and purity in a mouse cerebellum dataset.

bioRxiv · Nov 9, 2026 · PreprintBioinformatics