Hardy Weinberg Exact Test In Large Scale Variant Calling Quality Control
Zhuoyi Huang, Navin Rustagi, Degui Zhi, L. Adrienne Cupples, Richard A. Gibbs, Eric Boerwinkle, Fuli Yu
The paper develops a novel HWE filtering strategy to improve variant calling quality control in large-scale sequencing by optimizing p-value cutoffs based on site frequency spectra.
bioRxiv · Dec 19, 2016 · PreprintBioinformatics