Author

Ghanem-Elias Ghanem

Université Libre de Bruxelles

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Organism:human· 2 Assay:ATAC-seq· 1 Assay:ChIP-seq· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Organism:rat· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

David MauduitiD· 2 shared Gert J. HulselmansiD· 2 shared Ibrahim Ihsan TaskiraniD· 2 shared Jasper WoutersiD· 2 shared Liesbeth MinnoyeiD· 2 shared Stein AertsiD· 2 shared Valerie ChristiaensiD· 2 shared Aline Primot· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

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2 shared papersGenomics

David MauduitORCID

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2 papers

Recent·Most cited

GenomicsGenome ResearchPeer-reviewedJun 1, 2021

Prioritization of enhancer mutations by combining allele-specific chromatin accessibility with deep learning

Zeynep Kalender Atak, Ibrahim Ihsan Taskiran, Jonas Demeulemeester…·Stein Aerts

The paper uses a deep learning model on melanoma genomes to prioritize enhancer mutations by analyzing allelic imbalance in chromatin accessibility and gene expression.

48 citations

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsGenome ResearchPeer-reviewedDec 1, 2020

Cross-species analysis of melanoma enhancer logic using deep learning

Liesbeth Minnoye, Ibrahim Ihsan Taskiran, David Mauduit…·Stein Aerts

The paper uses deep learning to analyze enhancer logic across species in melanoma, identifying conserved regulatory complexes and their roles.

116 citations

humanmouse

𝕏 PostBluesky