Author

Haochen Ni

Chinese Academy of Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Organism:human· 1 Organism:mouse· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Boyuan MeiiD· 1 shared Dali HaniD· 1 shared Feifan Zhang· 1 shared Guanghao LiangiD· 1 shared Jian LiiD· 1 shared Jing YangiD· 1 shared Lihui DongiD· 1 shared Lin SheniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Boyuan MeiORCID

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1 paper

Recent·Most cited

Ultra-precision deconvolution of spatial transcriptomics decodes immune heterogeneity and fate-defining programs in tissues

Yin Xu, Zurui Huang, Yawei Zhang, Minghui Gong, Zhenghang Wang, Peijin Guo, Feifan Zhang, Jing Yang, Guanghao Liang, Lihui Dong, Renbao Chang, Yu Xia, Haochen Ni, Wenxuan Gong, Boyuan Mei, , Dali Han

The paper introduces UCASpatial, an ultra-precision spatial transcriptomics deconvolution algorithm, to improve the identification of immune cell subpopulations and their functional roles in tissue microenvironments.

Nature Communications · Mar 20, 2026Peer-reviewedBioinformatics