A novel core genome approach to enable prospective and dynamic monitoring of infectious outbreaks
Helen van Aggelen, Raivo Kolde, Hareesh Chamarthi, Joshua Loving, Yu Fan, John T. Fallon, Weihua Huang, Guiqing Wang, Mary M. Fortunato-Habib, Juan J. Carmona, Brian D. Gross
The paper introduces a core genome approach for prospective pathogen monitoring using conserved sequences, showing improved accuracy in identifying outbreak samples compared to traditional methods.
bioRxiv · Jan 5, 2019 · PreprintBioinformatics