LinearCapR: Linear-time computation of per-nucleotide structural-context probabilities of RNA without base-pair span limits
Takumi Otagaki, Hiroaki Hosokawa, Tsukasa Fukunaga, Junichi Iwakiri, Goro Terai, Kiyoshi Asai
LinearCapR computes per-nucleotide structural-context probabilities for RNA in linear time without span limits, outperforming existing methods on long-range structures and large RNAs.
Bioinformatics · Jun 1, 2026Peer-reviewedBioinformatics