Author

Irina Chupikova

University of Pennsylvania

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:phylogenetics / evolution· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Anna S. JaegeriD· 1 shared Elena Cruz-Adames· 1 shared Eman AnisiD· 1 shared Katie Kumta· 1 shared Lisa A Murphy· 1 shared Louise H. MonclaiD· 1 shared Stephen D. ShankiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Anna S. JaegerORCID

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1 paper

Recent·Most cited

Within- and between-host dynamics of highly pathogenic avian influenza in domestic birds from Pennsylvania farms and live bird markets

Anna S. Jaeger, Elena Cruz-Adames, Stephen D. Shank, Irina Chupikova, Katie Kumta, Lisa A Murphy, Eman Anis, Louise H. Moncla

The paper analyzes within- and between-host dynamics of H5 avian influenza in domestic birds and live bird markets, revealing viral evolution, transmission patterns, and risk factors for human spillover.

bioRxiv · Oct 6, 2026 · PreprintGenomics