Author

James Gong

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:protein structure· 1 Research Focus:protein structure prediction· 1 Approach:variational autoencoder· 1

Frequent Co-Authors

Barthelemy Meynard-PiganeauiD· 1 shared Eric P. XingiD· 1 shared Hugo Ly· 1 shared Jiayou Zhang· 1 shared Le SongiD· 1 shared Xingyi ChengiD· 1 shared Yingtao LuoiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Barthelemy Meynard-PiganeauORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

Balancing Locality and Reconstruction in Protein Structure Tokenizer

Jiayou Zhang, Barthelemy Meynard-Piganeau, James Gong, Xingyi Cheng, Yingtao Luo, Hugo Ly, Le Song, Eric P. Xing

This paper introduces a VQ-VAE-based protein structure tokenizer that balances reconstruction and retrieval, improving alignment with sequence models for better structure prediction.

bioRxiv · Dec 2, 2024 · PreprintBioinformatics